Press
February 2015: Jonathan named Genomeweb Young Investigator- Genomeweb: Young Investigator
January 2015: Whole-cell model named landmark study by Cell
- Cell: Cell Line: 1974-2014
May 2014: Mount Sinai profiles Jonathan
- Mount Sinai Institute for Genomics & Multiscale Biology: Annual Report
June 2013: DREAM 8 Whole-cell parameter estimation challenge
- The Scientist: May the Best Model Win
- Sage Bionetworks: Big data challenges to impact biomedical and clinical research
- Badische Zeitung: Winning a series of research
July 2012: M. genitalium whole-cell model published
- New York Times: In a First, an Entire Organism Is Simulated by Software
- BBC: The virtual cell that simulates life
- BBC: Will we ever… reveal all the secrets of life from DNA?
- BBC Radio interview
- The Atlantic: To Model the Simplest Microbe in the World, You Need 128 Computers
- Telegraph: 'Virtual bacteria' created by scientists
- Telegraph: Virtual cells: an amazing merger of the digital and biological
- MSNBC: Pesky germ inspires first complete 'virtual organism'
- Salon: The First Synthetic Organism: Our Victor Frankenstein Moment
- San Francisco Chronicle: Single-celled organism created
- NBC Bay Area: 1st Organism Modeled on Computers
- Business Insider: Check Out The First Complete Computer Model Of An Organism
- Endgadget: Scientists create first computer simulation of a complete organism
- American Scientist: Imitation of Life
- New Scientist: Virtual germ created on computer for first
- Chronical of Higher Education: Stanford Researchers Produce First Computer Model of Living Organism
- NLM: NLM-Funded Investigator Creates First Complete Computerized Simulation of an Organism
- Cell Preview: The Dawn of Virtual Cell Biology
- Nature News & Views: Systems biology: A cell in a computer
- Nature Highlight: 'Whole-cell' computer model
- Nature Biotechnology News & Views: Silicon dreams of cells into symbols
- Nature Methods News & Views: Life, simulated
- Faculty of 1000
- Bioengineered: Digital biology
- Microbe: Computer Model for Modest M. genitalium: Ambitious First Draft
- Communications of the ACM: Life in Simulation
- Popular Science: Researchers Build First Complete Computer Model of an Entire Organism
- Gizmodo: First Ever Complete Computer Model of a Cell Produced
- PC World: Researchers Make the World's First Complete Software Simulation of an Organism
- Venture Beat: Big leap in bio-engineering: scientists simulate an entire organism in software for the first time ever
- FierceBiotechIT: Venter, Stanford build first computer model of complete organism
- newsy: Scientists Create First Virtual Organism
Awards
- Yosef Roth, National Science Foundation Graduate Research Fellowship , March 2017
- Jonathan Karr, National Science Foundation INSPIRE Award , September 2016
- Jonathan Karr, National Institute of Health MIRA Award , July 2016
- Jonathan Karr, Genome Web Young Investigator , February 2015
- Jonathan Karr, National Academy of Sciences / Kavli Foundation Frontiers of Science Fellow , December 2014